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fragment-guided molecular dynamics algorithm  (Molecular Dynamics Inc)

 
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    Molecular Dynamics Inc fragment-guided molecular dynamics algorithm
    Fragment Guided Molecular Dynamics Algorithm, supplied by Molecular Dynamics Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/fragment-guided+molecular+dynamics+algorithm/fragment+guided+molecular+dynamics+conformation+sampling/pmc09103184-214-8-9
    Average 90 stars, based on 1 article reviews
    fragment-guided molecular dynamics algorithm - by Bioz Stars, 2026-11
    90/100 stars

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    other:

    Article Title: Kunitz-Type Peptides from Sea Anemones Protect Neuronal Cells against Parkinson’s Disease Inductors via Inhibition of ROS Production and ATP-Induced P2X7 Receptor Activation
    Article Snippet: The obtained models were further optimized using a fragment-guided molecular dynamics (FG-MD) algorithm [ ] or UCSF Chimera 1.11.2rc software [ ] using the Amber ff99SB protein force field and analyzed with the QMEAN server and other model quality assessment tools available within the SWISS-MODEL workspace [ ].

    Article Title: Computational Design of a Multi-Epitope Vaccine Against Porphyromonas gingivalis
    Article Snippet: The fragment-guided molecular dynamics ( ) algorithm was used for structure refinement at the atomic level.

    Article Title: Computational Design of a Multi-Epitope Vaccine Against Porphyromonas gingivalis
    Article Snippet: The accuracy of the predicted structure was improved using structure refinement tools (e.g., fragment-guided molecular dynamics algorithm).



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